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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs4650582 chr1:79027405 A/T GAGE12J chrX:49178536-49185863:+ -0.67 -7.19 1.45E-10 Box Plot
THYM rs4661200 chr1:156572914 A/G GAGE12D chrX:49306370-49313697:+ -0.37 -7.17 1.65E-10 Box Plot
THYM rs4694520 chr4:73618287 C/T RAB12 chr18:8609443-8639379:+ 0.65 7.35 7.02E-11 Box Plot
THYM rs4976636 chr5:176545092 A/G LOC388955 chr2:63849182-63850159:- -0.59 -8.08 2.01E-12 Box Plot
THYM rs4976637 chr5:176545142 G/A LOC388955 chr2:63849182-63850159:- -0.59 -8.08 2.01E-12 Box Plot
THYM rs4976639 chr5:176550301 A/C LOC388955 chr2:63849182-63850159:- 0.73 10.97 1.43E-18 Box Plot
THYM rs4976640 chr5:176552007 A/G LOC388955 chr2:63849182-63850159:- -0.59 -8.04 2.45E-12 Box Plot
THYM rs4976642 chr5:176673068 T/A LOC388955 chr2:63849182-63850159:- 0.6 8.76 7.25E-14 Box Plot
THYM rs4976676 chr5:176579540 T/C LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs4976680 chr5:176702746 T/C LOC388955 chr2:63849182-63850159:- 0.56 7.84 6.53E-12 Box Plot
THYM rs4976681 chr5:176704663 T/A LOC388955 chr2:63849182-63850159:- 0.56 7.84 6.53E-12 Box Plot
THYM rs4976682 chr5:176726002 A/G LOC388955 chr2:63849182-63850159:- 0.82 12.47 1.04E-21 Box Plot
THYM rs504697 chr6:44220076 C/T HSP90AB2P chr4:13335038-13340281:+ -0.57 -7.32 8.02E-11 Box Plot
THYM rs538628 chr17:44787313 G/C LOC644172 chr17:43677491-43679748:- 1.1 11.49 1.14E-19 Box Plot
THYM rs538628 chr17:44787313 G/C LRRC37A4 chr17:43578685-43595516:- -0.6 -9.57 1.4E-15 Box Plot